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Picrophilaceae - Wikipedia

From Wikipedia, the free encyclopedia

Picrophilaceae
Scientific classification
Domain:	Archaea
Kingdom:	Euryarchaeota
Class:	Thermoplasmata
Order:	Thermoplasmatales
Family:	Picrophilaceae Schleper et al. 1996
Genus
Picrophilus

In taxonomy, the Picrophilaceae are a family of microbes within Thermoplasmatales.^[1]

Morphology and ecology

The cells are round in shape, thermophilic, heterotrophic, and obligately aerobic. This species is hyperacidophilic, with an optimal pH of 0.7. Its optimal temperature is 60 °C. It has been isolated from fumaroles, acidic sediments, dry solfataric fields, and hot springs in Hokkaidō, Japan.^[2]

Phylogeny

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)^[3] and National Center for Biotechnology Information (NCBI).^[1]

16S rRNA based LTP_06_2022^[4]^[5]^[6]

53 marker proteins based GTDB 08-RS214^[7]^[8]^[9]

Thermoplasmatales

Thermoplasmataceae	Thermoplasma

Thermogymnomonas

Cuniculiplasmataceae	Cuniculiplasma

Picrophilaceae

Picrophilus

Ferroplasmataceae

	Acidiplasma

	Ferroplasma

Thermoplasmatales

Thermoplasma

	Cuniculiplasma

	Thermogymnomonas

Picrophilus

	Acidiplasma

	Ferroplasma

Thermoplasmataceae

References

^ ^a ^b Sayers; et al. "Picrophilaceae". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2021-11-17.
^ Anna-Louise Reysenbach; Kristen Brileya (2014-10-19). "The Family Picrophilaceae". In Eugene Rosenberg; Edward F. DeLong; Stephen Lory; Erko Stackebrandt; Fabiano Thompson (eds.). The Prokaryotes. Springer Berlin Heidelberg. pp. 319–321. doi:10.1007/978-3-642-38954-2_326. ISBN 978-3-642-38954-2.
^ J.P. Euzéby. "Picrophilaceae". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2021-11-17.
^ "The LTP". Retrieved 10 May 2023.
^ "LTP_all tree in newick format". Retrieved 10 May 2023.
^ "LTP_06_2022 Release Notes" (PDF). Retrieved 10 May 2023.
^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
^ "ar53_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.

Schleper C; Puhler G; Klenk HP; Zillig W (1996). "Picrophilus oshimae and Picrophilus torridus fam. nov., gen. nov., sp. nov., two species of hyperacidophilic, thermophilic, heterotrophic, aerobic archaea". Int. J. Syst. Bacteriol. 46 (3): 814–816. doi:10.1099/00207713-46-3-814.
Schleper C; Puehler G; Holz I; Gambacorta A; et al. (1995). "Picrophilus gen. nov., fam. nov.: a novel aerobic, heterotrophic, thermoacidophilic genus and family comprising archaea capable of growth around pH 0". J. Bacteriol. 177 (24): 7050–7059. doi:10.1128/jb.177.24.7050-7059.1995. PMC 177581. PMID 8522509.

Scientific books

Reysenbach, A-L (2001). "Order I. Thermoplasmatales ord. nov.". In DR Boone; RW Castenholz (eds.). Bergey's Manual of Systematic Bacteriology Volume 1: The Archaea and the deeply branching and phototrophic Bacteria (2nd ed.). New York: Springer Verlag. p. 169. ISBN 978-0-387-98771-2.

Prokaryotes: Archaea classification

(major groups

Hadesarchaea	"Hadarchaeia" "Hadarchaeales" "Persephonarchaeia"
"Hydrothermarchaeota"	"Hydrothermarchaeia" "Hydrothermarchaeles"
"Methanobacteriota"	Methanobacteria Methanobacteriales Methanococci Methanococcales Methanopyri Methanopyrus "Theionarchaeia" Thermococci "Methanofastidiosales" Thermococcales
"Halobacteriota"	Archaeoglobia Archaeoglobales "Mnemosynellales" Halobacteria Halobacteriales "Hikarchaeia" "Hikarchaeales" "Methanocellia" Methanocellales "Methanoliparia" "Methanoliparales" Methanomicrobia Methanomicrobiales Methanonatronarchaeia Methanonatronarchaeales Methanosarcinia Methanosarcinales Methanotrichales "Syntropharchaeia" "Methanophagales" "Syntropharchaeales"
"Thermoplasmatota"	"Izemarchaea" "Thermoprofundales" "Poseidoniia" "Poseidoniales" Thermoplasmata "Aciduliprofundales" "Gimiplasmatales" "Lunaplasmatales" Methanomassiliicoccales "Natronoplasmatales" "Sysuiplasmatales" Thermoplasmatales

DPANN

"Aenigmatarchaeota"
- "Aenigmatarchaeia"
"Altarchaeota"
- "Altarchaeia"
"Iainarchaeota"
- "Iainarchaeia"
"Huberarchaeota"
- "Huberarchaeia"
"Micrarchaeota"
- "Micrarchaeia"
"Nanohalarchaeota"
- "Nanohalarchaeia"
"Nanoarchaeota"
- "Nanoarchaeia"
- "Nanohalobiia"
"Undinarchaeota"
- "Undinarchaeia"

Proteoarchaeota

TACK

Thermoproteota	Korarchaeia "Korarchaeales" Bathyarchaeia "Hecatellales" Nitrososphaeria "Caldarchaeales" Conexivisphaerales "Geothermarchaeales" Nitrososphaerales "Culexarchaeia" "Culexarchaeles" "Methanomethylicia" "Methanomethylicales" "Nezhaarchaeales" Thermoproteia "Gearchaeales" "Marsarchaeales" Sulfolobales Thermoproteales

Asgard

Lokiarchaeota	"Baldrarchaeia" "Freyrarchaeia" "Hermodarchaeia" "Jordarchaeia" "Lokiarchaeia" "Helarchaeales" "Lokiarchaeales" "Sigynarchaeales" Odinarchaeia Thorarchaeia
Heimdallarchaeota	Heimdallarchaeia "Gerdarchaeales" "Heimdallarchaeales" "Hodarchaeales" "Kariarchaeales" "Njordarchaeia" "Sifarchaeia" "Borrarchaeales" "Sifarchaeales" "Wukongarchaeia"

Source:
Alternative views: Wikispecies

Taxon identifiers
Picrophilaceae	Wikidata: Q7191084 Wikispecies: Picrophilaceae CoL: 625MH EoL: 7925 GBIF: 8070 IRMNG: 105020 ITIS: 951474 LPSN: picrophilaceae.html NCBI: 46630 Open Tree of Life: 292964 WoRMS: 416271

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